Knowledge Navigator: LLM-guided Browsing Framework for Exploratory Search in Scientific Literature
Paper • 2408.15836 • Published • 14
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coronavirus origin | 1 | Virus–Host Coevolution with a Focus on Animal and Human DNA Viruses | Viruses have been infecting their host cells since the dawn of life, and this extremely long-term coevolution gave rise to some surprising consequences for the entire tree of life. It is hypothesised that viruses might have contributed to the formation of the first cellular life form, or that even the eukaryotic cell n... | 33fs6exl |
coronavirus origin | 1 | Origins of MERS-CoV, and lessons for 2019-nCoV | gyj5213f | |
coronavirus origin | 1 | The Origin and Evolution of Viruses | The lecture covers three main topics: (i) Viruses: properties, place in the living world, and possible origin; (ii) Molecular basis of viral variability and evolution; and (iii) Evolution of viral pathogenicity and emerging viral infections. | gy8d8285 |
coronavirus origin | 1 | Diversity of Coronaviruses in Bats: Insights Into Origin of SARS Coronavirus | 6foz003n | |
coronavirus origin | 1 | Intraspecies diversity of SARS-like coronaviruses in Rhinolophus sinicus and its implications for the origin of SARS coronaviruses in humans. | The Chinese rufous horseshoe bat (Rhinolophus sinicus) has been suggested to carry the direct ancestor of severe acute respiratory syndrome (SARS) coronavirus (SCoV), and the diversity of SARS-like CoVs (SLCoV) within this Rhinolophus species is therefore worth investigating. Here, we demonstrate the remarkable diversi... | 0t2a5500 |
coronavirus origin | 1 | Evidence for an Ancestral Association of Human Coronavirus 229E with Bats. | UNLABELLED We previously showed that close relatives of human coronavirus 229E (HCoV-229E) exist in African bats. The small sample and limited genomic characterizations have prevented further analyses so far. Here, we tested 2,087 fecal specimens from 11 bat species sampled in Ghana for HCoV-229E-related viruses by rev... | n2o7iiew |
coronavirus origin | 1 | Animal source of the coronavirus continues to elude scientists. | 4mtnqfqw | |
coronavirus origin | 1 | Severe Acute Respiratory Syndrome (SARS) Coronavirus ORF8 Protein Is Acquired from SARS-Related Coronavirus from Greater Horseshoe Bats through Recombination. | UNLABELLED Despite the identification of horseshoe bats as the reservoir of severe acute respiratory syndrome (SARS)-related coronaviruses (SARSr-CoVs), the origin of SARS-CoV ORF8, which contains the 29-nucleotide signature deletion among human strains, remains obscure. Although two SARS-related Rhinolophus sinicus ba... | phlxsez8 |
coronavirus origin | 1 | COVID-19-A Novel Zoonotic Disease: A Review of the Disease, the Virus, and Public Health Measures. | A cluster of cases of pneumonia of unknown etiology emerged in Wuhan, China, at the end of December 2019. The cluster was largely associated with a seafood and animal market. A novel Betacoronavirus was quickly identified as the causative agent, and it is shown to be related genetically to SARS-CoV and other bat-borne ... | qkl2yiqa |
coronavirus origin | 1 | COVID-19: animals, veterinary and zoonotic links. | Coronavirus disease 2019 (COVID-19), has spread over 210 countries and territories beyond China shortly. On February 29, 2020, the World Health Organization (WHO) denoted it in a high-risk category, and on March 11, 2020, this virus was designated pandemic, after its declaration being a Public Health International Emer... | 3uvuo4sf |
coronavirus origin | 1 | Global genetic patterns reveal host tropism versus cross-taxon transmission of bat Betacoronaviruses | Emerging infectious diseases due to coronavirus (CoV) infections have received significant global attention in the past decade and have been linked to bats as the original source. The diversity, distribution, and host associations of bat CoVs were investigated to assess their potential for zoonotic transmission. Phylog... | d8n9711b |
coronavirus origin | 1 | 2019 Novel Coronavirus Disease Outbreak and Molecular Genetic Characteristics of Severe Acute Respiratory Syndrome-coronavirus-2 | The 2019 novel coronavirus disease (COVID-19) outbreaks that emerged in Wuhan city, Hubei province, have led to a formidable number of confirmed cases that resulted in >5,700 deaths globally, including 143 countries in all 6 continents. The World Health Organization declared a Public Health Emergency of Internationa... | 9a475qhj |
coronavirus origin | 1 | Predicting wildlife hosts of betacoronaviruses for SARS-CoV-2 sampling prioritization | Despite massive investment in research on reservoirs of emerging pathogens, it remains difficult to rapidly identify the wildlife origins of novel zoonotic viruses. Viral surveillance is costly but rarely optimized using model-guided prioritization strategies, and predictions from a single model may be highly uncertain... | 9q5zckir |
coronavirus origin | 1 | The origin of SARS-CoV-2 in Istanbul: Sequencing findings from the epicenter of the pandemic in Turkey | OBJECTIVE: Turkey is one of the latest countries that COVID-19 disease was reported, with the first case on March 11, 2020, and since then, Istanbul became the epicenter of the pandemic in Turkey Here, we reveal sequences of the virus isolated from three different patients with various clinical presentations METHODS: N... | 9mrtic2k |
coronavirus origin | 1 | Animal origins of SARS coronavirus: possible links with the international trade in small carnivores. | The search for animal host origins of severe acute respiratory syndrome (SARS) coronavirus has so far remained focused on wildlife markets, restaurants and farms within China. A significant proportion of this wildlife enters China through an expanding regional network of illegal, international wildlife trade. We presen... | ur4eua83 |
coronavirus origin | 1 | Mosaic evolution of the severe acute respiratory syndrome coronavirus. | Severe acute respiratory syndrome (SARS) is a deadly form of pneumonia caused by a novel coronavirus, a viral family responsible for mild respiratory tract infections in a wide variety of animals including humans, pigs, cows, mice, cats, and birds. Analyses to date have been unable to identify the precise origin of the... | 8ccl9aui |
coronavirus origin | 1 | Evidence of the recombinant origin of a bat severe acute respiratory syndrome (SARS)-like coronavirus and its implications on the direct ancestor of SARS coronavirus. | Bats have been identified as the natural reservoir of severe acute respiratory syndrome (SARS)-like and SARS coronaviruses (SLCoV and SCoV). However, previous studies suggested that none of the currently sampled bat SLCoVs is the descendant of the direct ancestor of SCoV, based on their relatively distant phylogenetic ... | 6zfmjq9p |
coronavirus origin | 1 | SARS coronavirus without reservoir originated from an unnatural evolution, experienced the reverse evolution, and finally disappeared in the world. | jdpxu0ef | |
coronavirus origin | 1 | [Source of the COVID-19 pandemic: ecology and genetics of coronaviruses (Betacoronavirus: Coronaviridae) SARS-CoV, SARS-CoV-2 (subgenus Sarbecovirus), and MERS-CoV (subgenus Merbecovirus).] | Since the early 2000s, three novel zooanthroponous coronaviruses (Betacoronavirus) have emerged. The first outbreak of infection (SARS) caused by SARS-CoV virus occurred in the fall of 2002 in China (Guangdong Province). A second outbreak (MERS) associated with the new MERS-CoV virus appeared in Saudi Arabia in autumn ... | ia3rct46 |
coronavirus origin | 1 | Novel human coronavirus (SARS-CoV-2): A lesson from animal coronaviruses | The recent pandemic caused by the novel human coronavirus, referrred to as severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), not only is having a great impact on the health care systems and economies in all continents but it is also causing radical changes of common habits and life styles. The novel coronav... | su8czd4x |
coronavirus origin | 1 | COVID-19: Epidemiology, Evolution, and Cross-Disciplinary Perspectives | The recent outbreak of COVID-19 in Wuhan turned into a public health emergency of international concern. With no antiviral drugs nor vaccines, and the presence of carriers without obvious symptoms, traditional public health intervention measures are significantly less effective. Here, we report the epidemiological and ... | oi0zsdtd |
coronavirus origin | 1 | Cross-species transmission of the newly identified coronavirus 2019-nCoV | The current outbreak of viral pneumonia in the city of Wuhan, China, was caused by a novel coronavirus designated 2019-nCoV by the World Health Organization, as determined by sequencing the viral RNA genome. Many initial patients were exposed to wildlife animals at the Huanan seafood wholesale market, where poultry, sn... | niytf3wo |
coronavirus origin | 1 | 2019_nCoV/SARS-CoV-2: rapid classification of betacoronaviruses and identification of Traditional Chinese Medicine as potential origin of zoonotic coronaviruses | The current outbreak of a novel severe acute respiratory syndrome-like coronavirus, 2019_nCoV (now named SARS-CoV-2), illustrated difficulties in identifying a novel coronavirus and its natural host, as the coding sequences of various Betacoronavirus species can be highly diverse. By means of whole-genome sequence comp... | ex7rta8f |
coronavirus origin | 1 | Spillover of SARS-CoV-2 into novel wild hosts in North America: A conceptual model for perpetuation of the pathogen | There is evidence that the current outbreak of the novel coronavirus SARS-CoV-2, which causes COVID-19, is of animal origin. As with a number of zoonotic pathogens, there is a risk of spillover into novel hosts. Here, we propose a hypothesized conceptual model that illustrates the mechanism whereby the SARS-CoV-2 could... | lhh2b4r0 |
coronavirus origin | 1 | Origin and evolution of the 2019 novel coronavirus | xwi9pdd2 | |
coronavirus origin | 1 | Response to "Comments on "Homologous recombination within the spike glycoprotein of the newly identified coronavirus may boost cross-species transmission from snake to human" and "Codon bias analysis alone is uninformative for identifying host(s) of new virus" | We have recently reported for the first time that SARS-CoV-2 maybe a bat-originated coronavirus with a recombination occurred within the spike (S) protein gene based on phylogenetic and simplot analyses1 . These two conclusions are supported by findings recently reported by others and are well accepted in the field of ... | 3x2psny9 |
coronavirus origin | 1 | Mystery deepens over animal source of coronavirus | 3840bxvn | |
coronavirus origin | 1 | A pneumonia outbreak associated with a new coronavirus of probable bat origin | Since the outbreak of severe acute respiratory syndrome (SARS) 18 years ago, a large number of SARS-related coronaviruses (SARSr-CoVs) have been discovered in their natural reservoir host, bats1-4. Previous studies have shown that some bat SARSr-CoVs have the potential to infect humans5-7. Here we report the identifica... | w53u5ive |
coronavirus origin | 1 | COVID-19 and veterinarians for one health, zoonotic- and reverse-zoonotic transmissions | A novel coronavirus emerged in human populations and spread rapidly to cause the global coronavirus disease 2019 pandemic. Although the origin of the associated virus (severe acute respiratory syndrome coronavirus 2 [SARS-CoV-2]) remains unclear, genetic evidence suggests that bats are a reservoir host of the virus, an... | 3jgedokv |
coronavirus origin | 1 | Genomic variance of the 2019-nCoV coronavirus | There is a rising global concern for the recently emerged novel coronavirus (2019-nCoV). Full genomic sequences have been released by the worldwide scientific community in the last few weeks to understand the evolutionary origin and molecular characteristics of this virus. Taking advantage of all the genomic informatio... | uaoyounl |
coronavirus origin | 1 | Zoonotic origins of human coronaviruses | Mutation and adaptation have driven the co-evolution of coronaviruses (CoVs) and their hosts, including human beings, for thousands of years. Before 2003, two human CoVs (HCoVs) were known to cause mild illness, such as common cold. The outbreaks of severe acute respiratory syndrome (SARS) and the Middle East respirato... | dnla56uh |
coronavirus origin | 1 | Identification of a novel coronavirus causing severe pneumonia in human: a descriptive study | BACKGROUND: Human infections with zoonotic coronaviruses (CoVs), including severe acute respiratory syndrome (SARS)-CoV and Middle East respiratory syndrome (MERS)-CoV, have raised great public health concern globally. Here, we report a novel bat-origin CoV causing severe and fatal pneumonia in humans. METHODS: We coll... | klzen04m |
coronavirus origin | 1 | Detection of novel coronaviruses in bats in Myanmar | The recent emergence of bat-borne zoonotic viruses warrants vigilant surveillance in their natural hosts. Of particular concern is the family of coronaviruses, which includes the causative agents of severe acute respiratory syndrome (SARS), Middle East respiratory syndrome (MERS), and most recently, Coronavirus Disease... | yon280y8 |
coronavirus origin | 1 | Possible Bat Origin of Severe Acute Respiratory Syndrome Coronavirus 2 | We showed that severe acute respiratory syndrome coronavirus 2 is probably a novel recombinant virus. Its genome is closest to that of severe acute respiratory syndrome-related coronaviruses from horseshoe bats, and its receptor-binding domain is closest to that of pangolin viruses. Its origin and direct ancestral viru... | kqqantwg |
coronavirus origin | 1 | Zoonotic origins of human coronavirus 2019 (HCoV-19 / SARS-CoV-2): why is this work important? | The ongoing pandemic of coronavirus disease 2019 (COVID-19), caused by infection with human coronavirus 2019 (HCoV-19 / SARS-CoV-2 / 2019-nCoV), is a global threat to the human population. Here, we briefly summarize the available data for the zoonotic origins of HCoV-19, with reference to the other two epidemics of hig... | 75773gwg |
coronavirus origin | 1 | Master Regulator Analysis of the SARS-CoV-2/Human Interactome | The recent epidemic outbreak of a novel human coronavirus called SARS-CoV-2 causing the respiratory tract disease COVID-19 has reached worldwide resonance and a global effort is being undertaken to characterize the molecular features and evolutionary origins of this virus. In this paper, we set out to shed light on the... | tvoxbi3q |
coronavirus origin | 1 | Coronaviruses: origin and evolution | jkejiuf2 | |
coronavirus origin | 1 | Mapping the genomic landscape & diversity of COVID-19 based on >3950 clinical isolates of SARS-CoV-2: Likely origin & transmission dynamics of isolates sequenced in India | q8dq3alv | |
coronavirus origin | 1 | Pangolins Harbor SARS-CoV-2-Related Coronaviruses | The pandemic of coronavirus disease 2019 (COVID-19) caused by SARS-CoV-2 has posed a severe threat to global public health. Yet, the origin of SARS-CoV-2 remains mysterious. Several recent studies (e.g., Lam et al.,Xiao et al.) identified SARS-CoV-2-related viruses in pangolins, providing novel insights into the evolut... | pfv7q4v6 |
coronavirus origin | 1 | Genomic characterization and infectivity of a novel SARS-like coronavirus in Chinese bats | SARS coronavirus (SARS-CoV), the causative agent of the large SARS outbreak in 2003, originated in bats. Many SARS-like coronaviruses (SL-CoVs) have been detected in bats, particularly those that reside in China, Europe, and Africa. To further understand the evolutionary relationship between SARS-CoV and its reservoirs... | vp1r00m9 |
coronavirus origin | 1 | The virus whose family expanded | The discovery of many new species of hepaciviruses and pegiviruses, which exhibit enormous genetic diversity, in wild rodent and bat populations might help us to understand the origins of the hepatitis C virus. | nw0jbs1s |
coronavirus origin | 1 | Comments to the predecessor of human SARS coronavirus in 2003–2004 epidemic | xa8b1nuo | |
coronavirus origin | 1 | 2019-nCoV in context: lessons learned? | oxs4o9xe | |
coronavirus origin | 1 | Host-related nucleotide composition and codon usage as driving forces in the recent evolution of the Astroviridae | Abstract The evolutionary history of the Astroviridae comprises the ancient separation between avian and mammalian astrovirus lineages followed by diversification among mammalian astroviruses. The latter process included several cross-species transmissions. We found that the recent, but not the ancient, evolution of as... | vlpdirjs |
coronavirus origin | 1 | Exceptional diversity and selection pressure on SARS-CoV and SARS-CoV-2 host receptor in bats compared to other mammals | Pandemics originating from pathogen transmission between animals and humans highlight the broader need to understand how natural hosts have evolved in response to emerging human pathogens and which groups may be susceptible to infection. Here, we investigate angiotensin-converting enzyme 2 (ACE2), the host protein boun... | ijsn8d7b |
coronavirus origin | 1 | Newly identified viral genomes in pangolins with fatal disease | Epizootic pathogens pose a major threat to many wildlife species, particularly in the context of rapidly changing environments. Pangolins (order Pholidota) are highly threatened mammals, in large part due to the trade in illegal wildlife. During July to August 2018 four sick wild pangolins (three Manis javanica and one... | h3imwhss |
coronavirus origin | 1 | Origins of major human infectious diseases | Many of the major human infectious diseases, including some now confined to humans and absent from animals, are ‘new’ ones that arose only after the origins of agriculture. Where did they come from? Why are they overwhelmingly of Old World origins? Here we show that answers to these questions are different for tropical... | a1chcrk8 |
coronavirus origin | 1 | A Mathematical Model of the Evolution and Spread of Pathogenic Coronaviruses from Natural Host to Human Host | Coronaviruses are highly transmissible and are pathogenic viruses of the 21(st) century worldwide. In general, these viruses are originated in bats or rodents. At the same time, the transmission of the infection to the human host is caused by domestic animals that represent in the habitat the intermediate host. In this... | afx977mr |
coronavirus origin | 1 | Common RNA replication signals exist among group 2 coronaviruses: evidence for in vivo recombination between animal and human coronavius molecules | Abstract 5′ and 3′ UTR sequences on the coronavirus genome are known to carry cis-acting elements for DI RNA replication and presumably also virus genome replication. 5′ UTR-adjacent coding sequences are also thought to harbor cis-acting elements. Here we have determined the 5′ UTR and adjacent 289-nt sequences, and 3′... | 2l4xxu3v |
coronavirus origin | 1 | Isolation and Characterization of 2019-nCoV-like Coronavirus from Malayan Pangolins | The outbreak of 2019-nCoV in the central Chinese city of Wuhan at the end of 2019 poses unprecedent public health challenges to both China and the rest world1. The new coronavirus shares high sequence identity to SARS-CoV and a newly identified bat coronavirus2. While bats may be the reservoir host for various coronavi... | mw0wb8a8 |
coronavirus response to weather changes | 2 | Effect modification of environmental factors on influenza-associated mortality: a time-series study in two Chinese cities | BACKGROUND: Environmental factors have been associated with transmission and survival of influenza viruses but no studies have ever explored the role of environmental factors on severity of influenza infection. METHODS: We applied a Poisson regression model to the mortality data of two Chinese metropolitan cities locat... | crla8vrj |
coronavirus response to weather changes | 2 | Nature of transmission of Covid19 in India | We examine available data on the number of individuals infected by the Covid-19 virus, across several different states in India, over the period January 30, 2020 to April 10, 2020. It is found that the growth of the number of infected individuals $N(t)$ can be modeled across different states with a simple linear functi... | iv7dok0v |
coronavirus response to weather changes | 2 | Any contribution of the season change to the spread of covid-19 caused by sars-cov-2? | Background: Most people raise a similar concern during this tough time of the COVID-19 pandemic caused by SARS-CoV-2 infection regarding when this outbreak will come to end. A recent thorough-general study on the success of China dealing with COVID-19 outbreak has concluded to recommend the need for a multi-sectoral ap... | q3tc522t |
coronavirus response to weather changes | 2 | An environmental determinant of viral respiratory disease | The evident seasonality of influenza suggests a significant role for weather and climate as one of several determinants of viral respiratory disease (VRD), including social determinants which play a major role in shaping these phenomena. Based on the current mechanistic understanding of how VRDs are transmitted by smal... | 24pp67fw |
coronavirus response to weather changes | 2 | Impact Of Temperature and Sunshine Duration on Daily New Cases and Death due to COVID-19 | Background: The coronavirus pandemic (COVID-19) control has now become a critical issue for public health. Many ecological factors are proven to influence the transmission and survival of the virus. In this study, we aim to determine the association of different climate factors with the spread and mortality due to COVI... | t3e8bfnr |
coronavirus response to weather changes | 2 | Impact of Daily Weather on COVID-19 outbreak in India | The COVID-19 pandemic has outspread obstreperously in India. As of June 04, 2020, more than 2 lakh cases have been confirmed with a death rate of 2.81%. It has been noticed that, out of each 1000 tests, 53 result positively infected. In order to investigate the impact of weather conditions on daily transmission occurri... | uj8a09t3 |
coronavirus response to weather changes | 2 | Effect of Temperature on the Transmission of COVID-19: A Machine Learning Case Study in Spain | The novel coronavirus (COVID-19) has already spread to almost every country in the world and has infected over 3 million people. To understand the transmission mechanism of this highly contagious virus, it is necessary to study the potential factors, including meteorological conditions. Here, we present a machine learn... | r9yrr45q |
coronavirus response to weather changes | 2 | Associations of ambient air pollutants and meteorological factors with COVID-19 transmission in 31 Chinese provinces: A time-series study | Background: Evidence regarding the effects of ambient air pollutants and meteorological factors on COVID-19 transmission is limited. Objectives: To explore the associations of air pollutants and meteorological factors with COVID-19 confirmed cases across 31 Chinese provinces during the outbreak period. Methods: The num... | aqozmk1t |
coronavirus response to weather changes | 2 | The Association of Social Distancing, Population Density, and Temperature with the SARS-CoV-2 Instantaneous Reproduction Number in Counties Across the United States | Importance: The Covid-19 pandemic has been marked by considerable heterogeneity in outbreaks across the United States. Local factors that may be associated with variation in SARS-CoV-2 transmission have not been well studied. Objective: To examine the association of county-level factors with variation in the SARS-CoV-2... | tqnwk4o6 |
coronavirus response to weather changes | 2 | Diverse local epidemics reveal the distinct effects of population density, demographics, climate, depletion of susceptibles, and intervention in the first wave of COVID-19 in the United States | The SARS-CoV-2 pandemic has caused significant mortality and morbidity worldwide, sparing almost no community. As the disease will likely remain a threat for years to come, an understanding of the precise influences of human demographics and settlement, as well as the dynamic factors of climate, susceptible depletion, ... | t70lnidk |
coronavirus response to weather changes | 2 | Correlation of the global spread of coronavirus disease-19 with atmospheric air temperature | Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) is an enveloped virus that may be sensitive to heat. We assessed whether the spread of coronavirus disease 2019 (COVID-19) correlates with air temperature. We also studied whether additional climate, geographical, and population variables were correlated. The... | foha7ozb |
coronavirus response to weather changes | 2 | Temperature and Humidity Do Not Influence Global COVID-19 Incidence as Inferred from Causal Models | The relationship between meteorological factors such as temperature and humidity with COVID-19 incidence is still unclear after 6 months of the beginning of the pandemic. Some literature confirms the association of temperature with disease transmission while some oppose the same. This work intends to determine whether ... | 3yzxljjf |
coronavirus response to weather changes | 2 | Temperature and relative humidity are not major contributing factor on the occurrence of COVID-19 pandemic: An observational study in 57 countries | The world searching for hope has already experienced a huge loss of lives due to COVID-19 caused by SARS-CoV-2 started in Wuhan, China. There are speculations that climatic conditions can slowdown the transmission of COVID-19.Findings from the early outbreak indicated the possible association of air temperature and rel... | 51k50ebv |
coronavirus response to weather changes | 2 | Impacts of regional climate on the COVID-19 pandemic | The COVID-19 pandemic has led to six million confirmed cases by May 31, 2020. Impacts of regional weather and climate on epidemics have been investigated but need further study with new methods. We combined the number of monthly confirmed new cases and death with month, latitude, temperature, humidity, rainfall, and su... | k1l16pmm |
coronavirus response to weather changes | 2 | Climatic influence on the magnitude of COVID-19 outbreak: a stochastic model-based global analysis | This study examines the association between community transmission of COVID-19 cases and climatic predictors, considering travel information and annual parasite index across the three climatic zones, i.e., tropical, subtropical, and temperate. A Boosted Regression Tree model has been employed to understand the associat... | ioyl1gla |
coronavirus response to weather changes | 2 | Early transmission of COVID-19 has an optimal temperature but late transmission decreases in warm climate | The COVID-19 novel virus, as an emerging highly pathogenic agent, has caused a pandemic. Revealing the influencing factors affecting transmission of COVID-19 is essential to take effective control measures. Several previous studies suggested that the spread of COVID-19 was likely associated with temperature and/or humi... | t4k5csgy |
coronavirus response to weather changes | 2 | Meteorological Conditions and Covid-19 in Large U.S. Cities | To determine whether prevalence of Coronavirus disease 2019 (Covid-19) is modulated by meteorological conditions, we herein conducted meta-regression of data in large U.S. cities. We selected 33 large U.S. cities with a population of >500,000. The integrated numbers of confirmed Covid-19 cases in the country to which t... | 7usv3ljo |
coronavirus response to weather changes | 2 | Study of the Dependence of Effective Reproduction Number of COVID-19 on the Temperature and Humidity: A Case Study with the Indian States | Corona Virus Disease 2019 (COVID-19) started in Wuhan province of China in November 2019 and within a short time, it was declared as a worldwide pandemic by World Health Organisation due to very fast worldwide spread of the virus. In the absence of any vaccine, various mitigation measures were used. In the past, the ef... | n59q479q |
coronavirus response to weather changes | 2 | UV light influences covid-19 activity through big data: trade offs between northern subtropical, tropical, and southern subtropical countries | UV (ultraviolet) light is an important factor should be considered to predict coronavirus epidemic growth pace. UV is different from weather temperature since UV is electromagnetic wavelength from 10 nm to 400 nm in size, shorter than of visible lights. For some people, UV light can lead to cancer from unprotected sun ... | odbi4yvz |
coronavirus response to weather changes | 2 | Warmer weather and global trends in the coronavirus COVID-19 | Predicting COVID-19 epidemic development in the upcoming warm season has attracted much attention in the hope of providing helps to fight the epidemic. It requires weather (environmental) factors to be included in prediction models, but there are few models to achieve it successfully. In this study, we proposed a new c... | fj3a2y1o |
coronavirus response to weather changes | 2 | REGIONAL DETERMINANTS OF THE EXPANSION OF COVID-19 IN BRAZIL | Objective: This study investigates the regional differences in the occurrence of COVID-19 in Brazil and its relationship with climatic and demographic factors, for this, using data about identified cases of COVID-19 on Brazil from February 26 to April 04, 2020. Methods: A model using the Polynomial Regression with cubi... | epa6m6nq |
coronavirus response to weather changes | 2 | No Evidence for Temperature-Dependence of the COVID-19 Epidemic | The pandemic of the COVID-19 disease extended from China across the north-temperate zone, and more recently to the tropics and southern hemisphere. We find no evidence that spread rates decline with temperatures above 20 oC, suggesting that the COVID-19 disease is unlikely to behave as a seasonal respiratory virus. | bnrmh1qs |
coronavirus response to weather changes | 2 | ICU admissions and in-hospital deaths linked to covid-19 in the Paris region are correlated with previously observed ambient temperature | OBJECTIVE To study the effect of weather on severity indicators of coronavirus disease 2019 (covid-19). DESIGN Ecological study. SETTING Paris region. POPULATION Severely ill patients with covid-19. MAIN OUTCOME MEASURES Daily covid-19-related intensive care unit (ICU) admission and in-hospital deaths in the Paris regi... | gmlbbw9u |
coronavirus response to weather changes | 2 | Temperature dependence of COVID-19 transmission | The recent coronavirus pandemic follows in its early stages an almost exponential expansion, with the number of cases N reasonably well fit by N eαt, in many countries. We analyze the rate α in different countries, choosing as a starting point in each country the first day with 30 cases and fitting for the following 12... | 0oma7hdu |
coronavirus response to weather changes | 2 | Higher Air Temperature, Pressure, and Ultraviolet Are Associated with Less Covid-19 Incidence | A recent study from China suggests that high temperature and ultraviolet (UV) radiation cannot decrease the epidemics of Coronavirus disease 2019 (Covid-19). To determine whether COVID-19 incidence is modulated by meteorological factors, meta-regression of Japanese prefectural data was herein conducted. We extracted 1)... | 9nicryzs |
coronavirus response to weather changes | 2 | Weather variables impact on COVID-19 incidence | We test the hypothesis of COVID-19 contagion being influenced by meteorological parameters such as temperature or humidity. We analysed data at high spatial resolution (regions in Italy and counties in the USA) and found that while at low resolution this might seem the case, at higher resolution no correlation is found... | hadnxjeo |
coronavirus response to weather changes | 2 | Impact of weather on COVID-19 pandemic in Turkey | The coronavirus pandemic, which has numerous global implications, has led people to believe that nothing will be the same as before. The present day is dominated by studies on determining the factors that affect, taking preventive actions, and trying to find an effective treatment on top priority. Meteorological parame... | ds3nmssp |
coronavirus response to weather changes | 2 | Investigation of effective climatology parameters on COVID-19 outbreak in Iran | SARS CoV-2 (COVID-19) Coronavirus cases are confirmed throughout the world and millions of people are being put into quarantine. A better understanding of the effective parameters in infection spreading can bring about a logical measurement toward COVID-19. The effect of climatic factors on spreading of COVID-19 can pl... | 15slu3kk |
coronavirus response to weather changes | 2 | Distribution of the SARS-CoV-2 Pandemic and Its Monthly Forecast Based on Seasonal Climate Patterns | This paper investigates whether the Severe Acute Respiratory Syndrome CoronaVirus 2 (SARS-CoV-2) pandemic could have been favored by specific weather conditions and other factors. It is found that the 2020 winter weather in the region of Wuhan (Hubei, Central China)-where the virus first broke out in December and sprea... | 04rbtmmi |
coronavirus response to weather changes | 2 | Statistical analysis of the impact of environmental temperature on the exponential growth rate of cases infected by COVID-19 | We perform a statistical analysis for understanding the effect of the environmental temperature on the exponential growth rate of the cases infected by COVID-19 for US and Italian regions. In particular, we analyze the datasets of regional infected cases, derive the growth rates for regions characterized by a readable ... | q12b7uyr |
coronavirus response to weather changes | 2 | Asymmetric nexus between temperature and COVID-19 in the top ten affected provinces of China: A current application of quantile-on-quantile approach | The present study examines the asymmetrical effect of temperature on COVID-19 (Coronavirus Disease) from 22 January 2020 to 31 March 2020 in the 10 most affected provinces in China. This study used the Sim & Zhou' quantile-on-quantile (QQ) approach to analyze how the temperature quantities affect the different quantile... | 3tow59gc |
coronavirus response to weather changes | 2 | Maximum Daily Temperature, Precipitation, Ultra-Violet Light and Rates of Transmission of SARS-Cov-2 in the United States | BACKGROUND: Previous reports have suggested that transmission of SARS-CoV-2 is reduced by higher temperatures and higher humidity. We analyzed case-data from the United States to investigate effects of temperature, precipitation, and UV Light on community transmission of SARS-CoV-2. METHODS: Daily reported cases of SAR... | 7vwjcp53 |
coronavirus response to weather changes | 2 | The Weather Impacts the Outbreak of COVID-19 in Mainland China | Recent literature has suggested that climate conditions have considerably significant influences on the transmission of coronavirus COVID-19. However, there is a lack of comprehensive study that investigates the relationships between multiple weather factors and the development of COVID-19 pandemic while excluding the ... | akb96git |
coronavirus response to weather changes | 2 | Anomalous atmospheric circulation favored the spread of COVID-19 in Europe | The current pandemic caused by the coronavirus SARS-CoV-2 is having negative health, social and economic consequences worldwide. In Europe, the pandemic started to develop strongly at the end of February and beginning of March 2020. It has subsequently spread over the continent, with special virulence in northern Italy... | kpvxdhcu |
coronavirus response to weather changes | 2 | Evidence that high temperatures and intermediate relative humidity might favor the spread of COVID-19 in tropical climate: A case study for the most affected Brazilian cities | This study aimed to analyze how meteorological conditions such as temperature, humidity and rainfall can affect the spread of COVID-19 in five Brazilian (São Paulo, Rio de Janeiro, Brasília, Manaus and Fortaleza) cities. The cities selected were those with the largest number of confirmed cases considering data of April... | 5b9xjvwm |
coronavirus response to weather changes | 2 | Association between climate variables and global transmission oF SARS-CoV-2 | In this study, we aimed at analyzing the associations between transmission of and deaths caused by SARS-CoV-2 and meteorological variables, such as average temperature, minimum temperature, maximum temperature, and precipitation. Two outcome measures were considered, with the first aiming to study SARS-CoV-2 infections... | aekywz71 |
coronavirus response to weather changes | 2 | Effects of temperature and humidity on the daily new cases and new deaths of COVID-19 in 166 countries | The coronavirus disease 2019 (COVID-19) pandemic is the defining global health crisis of our time and the greatest challenge facing the world. Meteorological parameters are reportedly crucial factors affecting respiratory infectious disease epidemics; however, the effect of meteorological parameters on COVID-19 remains... | axn5dgkh |
coronavirus response to weather changes | 2 | A mechanism-based parameterisation scheme to investigate the association between transmission rate of COVID-19 and meteorological factors on plains in China | The novel coronavirus disease 2019 (COVID-19), which first emerged in Hubei province, China, has become a pandemic. However, data regarding the effects of meteorological factors on its transmission are limited and inconsistent. A mechanism-based parameterisation scheme was developed to investigate the association betwe... | o2lr936b |
coronavirus response to weather changes | 2 | Effect of weather on COVID-19 spread in the US: A prediction model for India in 2020 | The effect of weather on COVID-19 spread is poorly understood. Recently, few studies have claimed that warm weather can possibly slowdown the global pandemic, which has already affected over 1.6 million people worldwide. Clarification of such relationships in the worst affected country, the US, can be immensely benefic... | q2mn9y70 |
coronavirus response to weather changes | 2 | Short-term effects of specific humidity and temperature on COVID-19 morbidity in select US cities | Little is known about the environmental conditions that drive the spatiotemporal patterns of SARS-CoV-2. Preliminary research suggests an association with meteorological parameters. However, the relationship with temperature and humidity is not yet apparent for COVID-19 cases in US cities first impacted. The objective ... | qnkntgnv |
coronavirus response to weather changes | 2 | Impact of meteorological factors on the COVID-19 transmission: A multi-city study in China | The purpose of the present study is to explore the associations between novel coronavirus disease 2019 (COVID-19) case counts and meteorological factors in 30 provincial capital cities of China. We compiled a daily dataset including confirmed case counts, ambient temperature (AT), diurnal temperature range (DTR), absol... | c32lvwcc |
coronavirus response to weather changes | 2 | Temperature significantly changes COVID-19 transmission in (sub)tropical cities of Brazil | The coronavirus disease 2019 (COVID-19) outbreak has become a severe public health issue. The novelty of the virus prompts a search for understanding of how ecological factors affect the transmission and survival of the virus. Several studies have robustly identified a relationship between temperature and the number of... | dekdf7vu |
coronavirus response to weather changes | 2 | Projections for COVID-19 pandemic in India and effect of temperature and humidity | BACKGROUND AND AIMS: As, the COVID-19 has been deemed a pandemic by World Health Organization (WHO), and since it spreads everywhere throughout the world, investigation in relation to this disease is very much essential. Investigation of pattern in the occurrence of COVID-19, to check the influence of different meteoro... | ipxvnlu2 |
coronavirus response to weather changes | 2 | Development of an Assessment Method for Investigating the Impact of Climate and Urban Parameters in Confirmed Cases of COVID-19: A New Challenge in Sustainable Development | Sustainable development has been a controversial global topic, and as a complex concept in recent years, it plays a key role in creating a favorable future for societies. Meanwhile, there are several problems in the process of implementing this approach, like epidemic diseases. Hence, in this study, the impact of clima... | qmrgkkpr |
coronavirus response to weather changes | 2 | Factors determining the diffusion of COVID-19 and suggested strategy to prevent future accelerated viral infectivity similar to COVID | This study has two goals. The first is to explain the geo-environmental determinants of the accelerated diffusion of COVID-19 that is generating a high level of deaths. The second is to suggest a strategy to cope with future epidemic threats similar to COVID-19 having an accelerated viral infectivity in society. Using ... | kysm5eq2 |
coronavirus response to weather changes | 2 | Impact of temperature on the dynamics of the COVID-19 outbreak in China | A COVID-19 outbreak emerged in Wuhan, China at the end of 2019 and developed into a global pandemic during March 2020. The effects of temperature on the dynamics of the COVID-19 epidemic in China are unknown. Data on COVID-19 daily confirmed cases and daily mean temperatures were collected from 31 provincial-level regi... | u1mrvjjf |
coronavirus response to weather changes | 2 | Arctic Oscillation: possible trigger of COVID-19 outbreak | The current COVID-19 pandemic is having detrimental consequences worldwide. The pandemic started to develop strongly by the end of January and beginning of February 2020, first in China with subsequent rapid spread to other countries with new epicenters of the outbreaks concentrated mainly within the 30-50 degrees Nort... | n0c0928t |
coronavirus response to weather changes | 2 | Assessing the relationship between ground levels of ozone (O3) and nitrogen dioxide (NO2) with coronavirus (COVID-19) in Milan, Italy | This paper investigates the correlation between the high level of coronavirus SARS-CoV-2 infection accelerated transmission and lethality, and surface air pollution in Milan metropolitan area, Lombardy region in Italy. For January-April 2020 period, time series of daily average inhalable gaseous pollutants ozone (O3) a... | ksu2gjyb |
coronavirus response to weather changes | 2 | Prioritizing and Analyzing the Role of Climate and Urban Parameters in the Confirmed Cases of COVID-19 Based on Artificial Intelligence Applications | Nowadays, an infectious disease outbreak is considered one of the most destructive effects in the sustainable development process. The outbreak of new coronavirus (COVID-19) as an infectious disease showed that it has undesirable social, environmental, and economic impacts, and leads to serious challenges and threats. ... | nz5fqi0e |
coronavirus response to weather changes | 2 | Susceptible supply limits the role of climate in the early SARS-CoV-2 pandemic | Preliminary evidence suggests that climate may modulate the transmission of SARS-CoV-2. Yet it remains unclear whether seasonal and geographic variations in climate can substantially alter the pandemic trajectory, given high susceptibility is a core driver. Here, we use a climate-dependent epidemic model to simulate th... | aiwxlxzt |
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CLUSTREC-COVID: A Topical Clustering Benchmark for COVID-19 Scientific Research
Dataset Summary
CLUSTREC-COVID is a modified version of the TREC-COVID dataset, transformed into a topical clustering benchmark. The dataset consists of titles and abstracts from scientific papers about COVID-19 research, covering a diverse range of research topics. Each document in the dataset is assigned to a specific subtopic, making it ideal for use in document clustering and topic modeling tasks.
The dataset is useful for researchers aiming to evaluate clustering algorithms and techniques for automatic organization of scientific literature. It can also be used for exploring information retrieval systems that aim to group documents by subtopic or related research areas.
The source of this dataset is the TREC-COVID retrieval dataset, which has been adapted for clustering and organization tasks.
Dataset Structure
Each document in the dataset includes the following fields:
- topic_name (string): The specific subtopic to which the document has been assigned. (e.g., "coronavirus response to weather changes").
- topic_id (string): A unique identifier for the topic. (cluster identifier)
- title (string): The title of the scientific paper.
- abstract (string): The abstract or summary of the paper.
- doc_id (string): A unique document identifier.
Example Entry
{
"topic_name": "coronavirus response to weather changes",
"topic_id": "2",
"title": "Weather variables impact on COVID-19 incidence",
"abstract": "We test the hypothesis of COVID-19 contagion being influenced by meteorological parameters such as temperature or humidity.\
We analysed data at high spatial resolution (regions in Italy and counties in the USA) and found that while at low resolution this might seem the case,\
at higher resolution no correlation is found. Our results are consistent with a poor outdoors transmission of the disease. However,\
a possible indirect correlation between good weather and a decrease in disease spread may occur,\
as people spend longer time outdoors.",
"doc_id": "hadnxjeo",
}
Citation Information
Cite as:
@article{katz2024knowledge,
title={Knowledge Navigator: LLM-guided Browsing Framework for Exploratory Search in Scientific Literature},
author={Katz, Uri and Levy, Mosh and Goldberg, Yoav},
journal={arXiv preprint arXiv:2408.15836},
year={2024}
}
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