Split (1)

train · 10k rows

sample_id stringlengths 23 23	population stringclasses 7 values	region stringclasses 5 values	is_SSA bool 2 classes	is_reference_panel bool 2 classes	sex stringclasses 2 values	age int64 18 90	diet_pattern stringclasses 3 values	enterotype stringclasses 3 values	shannon_index float64 1.98 5.43	observed_richness int64 43 306	rel_abundance_Bacteroides float64 0 0.76	rel_abundance_Prevotella float64 0 0.78	rel_abundance_Faecalibacterium float64 0.05 0.38	rel_abundance_Ruminococcus float64 0.05 0.49	functional_SCFA_potential float64 1.22 5	functional_Bile_acid_potential float64 0.87 5	functional_Mucin_deg_potential float64 1.26 4.95
MICROBIOME_SAMPLE_00201	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Prevotella	4.837	196	0.0746	0.6902	0.1431	0.0921	4.35207	3.277085	3.092172
MICROBIOME_SAMPLE_00202	SSA_West	West	true	false	Female	65	Mixed_transition	Prevotella	4.563	189	0.0825	0.6242	0.1333	0.16	4.362885	2.773976	2.268328
MICROBIOME_SAMPLE_00203	SSA_West	West	true	false	Female	51	High_fiber_plant_rich	Prevotella	3.801	221	0.0258	0.6644	0.1473	0.1625	3.587536	1.613294	2.968509
MICROBIOME_SAMPLE_00204	SSA_West	West	true	false	Female	57	High_fiber_plant_rich	Ruminococcus_like	3.957	217	0.1993	0.2297	0.2705	0.3005	3.172936	3.03538	3.607278
MICROBIOME_SAMPLE_00205	SSA_West	West	true	false	Female	27	Westernized_high_fat_sugar	Prevotella	4.447	186	0.0597	0.6639	0.1069	0.1695	4.4085	2.309933	2.886844
MICROBIOME_SAMPLE_00206	SSA_West	West	true	false	Female	49	Mixed_transition	Bacteroides	3.862	175	0.6712	0.0744	0.1602	0.0943	2.63906	3.589013	1.853276
MICROBIOME_SAMPLE_00207	SSA_West	West	true	false	Female	41	High_fiber_plant_rich	Prevotella	4.61	171	0.0871	0.6566	0.1202	0.1362	4.691477	2.49159	3.0495
MICROBIOME_SAMPLE_00208	SSA_West	West	true	false	Female	37	High_fiber_plant_rich	Prevotella	4.084	126	0.0657	0.6527	0.1565	0.125	4.191251	2.417905	2.400796
MICROBIOME_SAMPLE_00209	SSA_West	West	true	false	Female	40	High_fiber_plant_rich	Prevotella	4.559	158	0.039	0.6804	0.1389	0.1417	3.704244	2.486088	3.586038
MICROBIOME_SAMPLE_00210	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Ruminococcus_like	4.112	154	0.1591	0.143	0.2844	0.4135	3.264404	2.876887	3.084144
MICROBIOME_SAMPLE_00211	SSA_West	West	true	false	Female	60	High_fiber_plant_rich	Prevotella	3.646	222	0.0635	0.6347	0.1381	0.1637	4.066201	2.102767	2.617163
MICROBIOME_SAMPLE_00212	SSA_West	West	true	false	Female	35	Mixed_transition	Prevotella	4.086	186	0.0721	0.6357	0.1194	0.1728	3.807075	2.451688	2.075866
MICROBIOME_SAMPLE_00213	SSA_West	West	true	false	Female	50	Mixed_transition	Bacteroides	3.708	275	0.5654	0.104	0.1635	0.1671	2.520371	4.442561	2.938675
MICROBIOME_SAMPLE_00214	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Bacteroides	4.045	192	0.598	0.0863	0.202	0.1137	3.056942	3.652706	3.107865
MICROBIOME_SAMPLE_00215	SSA_West	West	true	false	Female	46	High_fiber_plant_rich	Prevotella	4.036	129	0.1217	0.619	0.146	0.1133	3.465199	2.318024	2.662595
MICROBIOME_SAMPLE_00216	SSA_West	West	true	false	Female	61	Westernized_high_fat_sugar	Prevotella	3.507	194	0.0734	0.6191	0.1384	0.1691	3.574582	2.604717	3.073072
MICROBIOME_SAMPLE_00217	SSA_West	West	true	false	Female	56	Mixed_transition	Prevotella	4.43	159	0.0645	0.6653	0.1165	0.1536	3.568324	2.335615	3.078691
MICROBIOME_SAMPLE_00218	SSA_West	West	true	false	Female	65	Mixed_transition	Prevotella	4.272	198	0.0587	0.6353	0.1671	0.1389	4.218139	2.552089	2.721033
MICROBIOME_SAMPLE_00219	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Prevotella	4.576	236	0.092	0.5787	0.1957	0.1336	4.096423	2.391175	2.448093
MICROBIOME_SAMPLE_00220	SSA_West	West	true	false	Female	42	Westernized_high_fat_sugar	Bacteroides	4.468	231	0.701	0.0615	0.1585	0.079	2.553413	4.121084	2.504998
MICROBIOME_SAMPLE_00221	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Prevotella	4.586	188	0.1208	0.6079	0.1446	0.1266	4.829795	2.471882	3.75123
MICROBIOME_SAMPLE_00222	SSA_West	West	true	false	Female	53	Westernized_high_fat_sugar	Bacteroides	4.147	219	0.6094	0.0924	0.1276	0.1706	1.992644	3.762367	3.038245
MICROBIOME_SAMPLE_00223	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Prevotella	3.341	207	0.1082	0.5711	0.1882	0.1324	3.216523	1.775648	3.20798
MICROBIOME_SAMPLE_00224	SSA_West	West	true	false	Female	38	High_fiber_plant_rich	Ruminococcus_like	3.621	194	0.1881	0.1825	0.2674	0.3621	3.269858	3.121032	3.501029
MICROBIOME_SAMPLE_00225	SSA_West	West	true	false	Female	51	High_fiber_plant_rich	Prevotella	3.375	226	0.048	0.6821	0.1353	0.1346	3.416694	2.172189	3.159732
MICROBIOME_SAMPLE_00226	SSA_West	West	true	false	Female	53	Mixed_transition	Prevotella	3.902	222	0.0595	0.6093	0.1589	0.1723	3.776304	2.879683	2.559723
MICROBIOME_SAMPLE_00227	SSA_West	West	true	false	Female	78	High_fiber_plant_rich	Bacteroides	4.115	182	0.544	0.1129	0.1477	0.1954	2.711701	3.538481	2.366597
MICROBIOME_SAMPLE_00228	SSA_West	West	true	false	Female	71	High_fiber_plant_rich	Ruminococcus_like	3.91	174	0.1884	0.2496	0.2716	0.2904	2.834437	3.104915	3.437198
MICROBIOME_SAMPLE_00229	SSA_West	West	true	false	Female	41	High_fiber_plant_rich	Prevotella	4.472	182	0.1003	0.602	0.1663	0.1314	3.420803	2.637295	3.459017
MICROBIOME_SAMPLE_00230	SSA_West	West	true	false	Female	47	Westernized_high_fat_sugar	Bacteroides	3.438	148	0.6313	0.0677	0.1378	0.1632	2.388564	3.65641	2.71137
MICROBIOME_SAMPLE_00231	SSA_West	West	true	false	Female	34	Westernized_high_fat_sugar	Prevotella	3.842	148	0.084	0.6228	0.156	0.1372	3.743389	2.285233	3.322809
MICROBIOME_SAMPLE_00232	SSA_West	West	true	false	Female	44	Mixed_transition	Prevotella	4.394	150	0.0849	0.6644	0.103	0.1477	3.753022	2.566439	3.167915
MICROBIOME_SAMPLE_00233	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Bacteroides	4.216	149	0.5981	0.051	0.1807	0.1702	2.872161	4.485397	2.468009
MICROBIOME_SAMPLE_00234	SSA_West	West	true	false	Female	63	Mixed_transition	Prevotella	3.459	137	0.0944	0.6386	0.1188	0.1482	3.835109	2.754261	2.924185
MICROBIOME_SAMPLE_00235	SSA_West	West	true	false	Female	42	High_fiber_plant_rich	Ruminococcus_like	4.392	141	0.1865	0.1521	0.24	0.4214	3.249709	2.912985	3.43398
MICROBIOME_SAMPLE_00236	SSA_West	West	true	false	Female	43	Westernized_high_fat_sugar	Prevotella	3.888	213	0.0302	0.7201	0.1041	0.1457	3.360467	1.977499	3.419067
MICROBIOME_SAMPLE_00237	SSA_West	West	true	false	Female	26	Westernized_high_fat_sugar	Prevotella	3.52	153	0.0819	0.6695	0.1211	0.1275	3.547461	3.063298	2.710018
MICROBIOME_SAMPLE_00238	SSA_West	West	true	false	Female	48	High_fiber_plant_rich	Prevotella	4.542	157	0.1068	0.618	0.1795	0.0957	3.958178	3.050175	3.178902
MICROBIOME_SAMPLE_00239	SSA_West	West	true	false	Female	38	Mixed_transition	Prevotella	3.806	237	0.0822	0.6469	0.1403	0.1305	4.306665	2.503741	2.832016
MICROBIOME_SAMPLE_00240	SSA_West	West	true	false	Female	44	Mixed_transition	Bacteroides	4.276	169	0.6039	0.0782	0.1501	0.1678	2.867483	3.91747	2.524566
MICROBIOME_SAMPLE_00241	SSA_West	West	true	false	Female	40	High_fiber_plant_rich	Bacteroides	4.398	187	0.5933	0.1083	0.136	0.1625	2.706223	3.543479	3.10324
MICROBIOME_SAMPLE_00242	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Bacteroides	4.541	161	0.618	0.0641	0.178	0.1399	2.903393	4.037784	2.4499
MICROBIOME_SAMPLE_00243	SSA_West	West	true	false	Female	31	High_fiber_plant_rich	Prevotella	3.536	220	0.0106	0.7266	0.1545	0.1082	3.620614	1.746365	3.053153
MICROBIOME_SAMPLE_00244	SSA_West	West	true	false	Female	34	High_fiber_plant_rich	Ruminococcus_like	3.978	173	0.189	0.193	0.2966	0.3214	3.188076	2.745869	3.465195
MICROBIOME_SAMPLE_00245	SSA_West	West	true	false	Female	73	High_fiber_plant_rich	Bacteroides	3.932	200	0.6189	0.093	0.1514	0.1368	2.676513	3.433126	2.827663
MICROBIOME_SAMPLE_00246	SSA_West	West	true	false	Female	36	Westernized_high_fat_sugar	Prevotella	4.188	246	0.081	0.6347	0.1211	0.1631	3.891918	1.789808	2.821965
MICROBIOME_SAMPLE_00247	SSA_West	West	true	false	Female	38	High_fiber_plant_rich	Prevotella	4.053	187	0.0662	0.6432	0.1	0.1906	3.986866	2.632084	2.951135
MICROBIOME_SAMPLE_00248	SSA_West	West	true	false	Female	70	High_fiber_plant_rich	Bacteroides	3.89	225	0.6025	0.0532	0.1672	0.1771	2.777088	3.406398	1.960803
MICROBIOME_SAMPLE_00249	SSA_West	West	true	false	Female	82	High_fiber_plant_rich	Prevotella	3.962	150	0.0573	0.6335	0.1319	0.1773	4.369988	2.473735	2.118271
MICROBIOME_SAMPLE_00250	SSA_West	West	true	false	Female	37	High_fiber_plant_rich	Bacteroides	3.801	197	0.6344	0.0259	0.1822	0.1575	2.743057	4.097931	2.293212
MICROBIOME_SAMPLE_00251	SSA_West	West	true	false	Female	46	Westernized_high_fat_sugar	Prevotella	4.705	159	0.1061	0.5816	0.2033	0.109	4.422635	2.255042	3.186009
MICROBIOME_SAMPLE_00252	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Ruminococcus_like	2.981	278	0.198	0.0803	0.3045	0.4172	2.913968	2.716658	3.392063
MICROBIOME_SAMPLE_00253	SSA_West	West	true	false	Female	69	Mixed_transition	Prevotella	4.685	230	0.0678	0.6248	0.1425	0.165	4.023957	2.65377	3.245368
MICROBIOME_SAMPLE_00254	SSA_West	West	true	false	Female	39	High_fiber_plant_rich	Prevotella	4.308	268	0.0291	0.6633	0.1971	0.1104	4.40044	2.853887	2.309262
MICROBIOME_SAMPLE_00255	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Bacteroides	4.076	179	0.65	0.0728	0.1384	0.1389	2.463604	3.368186	2.411146
MICROBIOME_SAMPLE_00256	SSA_West	West	true	false	Female	59	High_fiber_plant_rich	Ruminococcus_like	4.582	198	0.1728	0.1523	0.2976	0.3773	3.166273	3.105012	3.607756
MICROBIOME_SAMPLE_00257	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Bacteroides	3.779	169	0.6368	0.0634	0.1116	0.1881	2.223049	3.814099	2.796465
MICROBIOME_SAMPLE_00258	SSA_West	West	true	false	Female	46	Mixed_transition	Bacteroides	4.55	204	0.6161	0.0949	0.0831	0.2059	2.069659	3.368632	2.912751
MICROBIOME_SAMPLE_00259	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Prevotella	3.872	237	0.0706	0.6008	0.1789	0.1498	4.446003	2.629019	3.856649
MICROBIOME_SAMPLE_00260	SSA_West	West	true	false	Female	35	High_fiber_plant_rich	Bacteroides	4.388	179	0.6792	0	0.1609	0.1599	2.544314	3.449229	2.962449
MICROBIOME_SAMPLE_00261	SSA_West	West	true	false	Female	47	Westernized_high_fat_sugar	Prevotella	4.085	208	0.1045	0.6034	0.1553	0.1368	3.797597	2.343377	2.786583
MICROBIOME_SAMPLE_00262	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Prevotella	3.782	182	0.0278	0.6358	0.1425	0.194	4.539381	1.98637	2.980708
MICROBIOME_SAMPLE_00263	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Prevotella	4.033	178	0.1276	0.6444	0.1559	0.0721	4.329427	2.873702	2.479188
MICROBIOME_SAMPLE_00264	SSA_West	West	true	false	Female	44	Mixed_transition	Prevotella	4.108	206	0.0573	0.6312	0.1122	0.1993	4.49677	2.732846	2.483809
MICROBIOME_SAMPLE_00265	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Ruminococcus_like	3.252	141	0.1894	0.172	0.2469	0.3917	2.846488	2.817904	3.141188
MICROBIOME_SAMPLE_00266	SSA_West	West	true	false	Male	61	Westernized_high_fat_sugar	Ruminococcus_like	3.901	130	0.1679	0.205	0.2951	0.3321	3.413329	2.925935	3.944434
MICROBIOME_SAMPLE_00267	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Bacteroides	4.458	174	0.632	0.0909	0.1145	0.1626	2.813799	3.945626	2.360427
MICROBIOME_SAMPLE_00268	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Prevotella	3.85	185	0.0766	0.6076	0.1707	0.1451	4.030263	2.504054	3.193162
MICROBIOME_SAMPLE_00269	SSA_West	West	true	false	Female	51	High_fiber_plant_rich	Prevotella	4.536	194	0.1022	0.7087	0.1018	0.0873	3.622253	2.606918	3.419156
MICROBIOME_SAMPLE_00270	SSA_West	West	true	false	Female	50	High_fiber_plant_rich	Prevotella	3.786	238	0.0299	0.6181	0.1728	0.1793	4.152281	2.26339	3.042539
MICROBIOME_SAMPLE_00271	SSA_West	West	true	false	Female	42	High_fiber_plant_rich	Bacteroides	3.66	180	0.5926	0.1153	0.1351	0.157	2.993216	4.311937	2.683424
MICROBIOME_SAMPLE_00272	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Bacteroides	4.509	234	0.5615	0.132	0.1332	0.1733	2.631025	3.77585	2.517393
MICROBIOME_SAMPLE_00273	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Bacteroides	3.986	144	0.6294	0.0401	0.1485	0.182	2.315553	4.190177	2.552314
MICROBIOME_SAMPLE_00274	SSA_West	West	true	false	Female	73	High_fiber_plant_rich	Prevotella	4.658	142	0.1072	0.605	0.1284	0.1594	3.871011	2.514271	2.683434
MICROBIOME_SAMPLE_00275	SSA_West	West	true	false	Female	67	High_fiber_plant_rich	Ruminococcus_like	4.079	214	0.2199	0.152	0.3001	0.3279	2.339868	2.700775	3.733864
MICROBIOME_SAMPLE_00276	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Prevotella	4.122	191	0.0917	0.6138	0.1439	0.1506	3.453852	1.848367	2.754117
MICROBIOME_SAMPLE_00277	SSA_West	West	true	false	Female	42	Mixed_transition	Bacteroides	3.877	169	0.6238	0.089	0.1987	0.0884	2.849201	3.755539	2.810289
MICROBIOME_SAMPLE_00278	SSA_West	West	true	false	Female	38	Mixed_transition	Bacteroides	4.478	146	0.6401	0.0718	0.1605	0.1276	2.774753	4.434515	2.211257
MICROBIOME_SAMPLE_00279	SSA_West	West	true	false	Female	63	High_fiber_plant_rich	Bacteroides	3.981	238	0.6295	0.0767	0.1289	0.1649	2.601209	4.05436	2.345518
MICROBIOME_SAMPLE_00280	SSA_West	West	true	false	Female	53	Mixed_transition	Ruminococcus_like	4.659	212	0.2202	0.1786	0.2578	0.3434	3.795268	3.495028	2.966049
MICROBIOME_SAMPLE_00281	SSA_West	West	true	false	Female	55	High_fiber_plant_rich	Prevotella	4.022	128	0.0307	0.7075	0.113	0.1488	4.285737	2.167617	2.933385
MICROBIOME_SAMPLE_00282	SSA_West	West	true	false	Female	31	Westernized_high_fat_sugar	Bacteroides	4.303	140	0.6178	0.0396	0.1768	0.1658	2.580115	3.748687	2.729134
MICROBIOME_SAMPLE_00283	SSA_West	West	true	false	Female	60	High_fiber_plant_rich	Prevotella	3.846	188	0.0628	0.6678	0.1255	0.1438	4.186371	2.96021	2.575526
MICROBIOME_SAMPLE_00284	SSA_West	West	true	false	Female	55	Mixed_transition	Prevotella	5.101	203	0.0363	0.6374	0.1811	0.1452	3.97615	2.687599	2.762001
MICROBIOME_SAMPLE_00285	SSA_West	West	true	false	Female	38	High_fiber_plant_rich	Bacteroides	4.792	147	0.6326	0.0935	0.1564	0.1175	2.200494	4.009007	2.288048
MICROBIOME_SAMPLE_00286	SSA_West	West	true	false	Female	45	High_fiber_plant_rich	Prevotella	3.751	212	0.0687	0.6649	0.151	0.1154	3.669819	2.29603	2.442263
MICROBIOME_SAMPLE_00287	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Prevotella	3.52	170	0.073	0.619	0.1516	0.1564	4.96068	2.860258	2.245452
MICROBIOME_SAMPLE_00288	SSA_West	West	true	false	Female	51	High_fiber_plant_rich	Bacteroides	4.33	157	0.6587	0.0425	0.1488	0.15	2.474798	3.325395	2.99281
MICROBIOME_SAMPLE_00289	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Prevotella	4.11	135	0.1037	0.6509	0.1335	0.1119	3.734292	2.218503	2.857269
MICROBIOME_SAMPLE_00290	SSA_West	West	true	false	Female	49	High_fiber_plant_rich	Bacteroides	4.488	196	0.6403	0.0588	0.1719	0.1291	2.721593	4.122049	2.818138
MICROBIOME_SAMPLE_00291	SSA_West	West	true	false	Female	47	High_fiber_plant_rich	Prevotella	4.633	135	0.0679	0.6692	0.1551	0.1077	3.56067	2.514829	3.104338
MICROBIOME_SAMPLE_00292	SSA_West	West	true	false	Female	52	High_fiber_plant_rich	Prevotella	3.494	212	0.0458	0.6402	0.1393	0.1747	4.096852	2.160359	3.043837
MICROBIOME_SAMPLE_00293	SSA_West	West	true	false	Female	66	High_fiber_plant_rich	Ruminococcus_like	4.076	161	0.1643	0.2129	0.2479	0.3749	3.775048	3.060157	2.968347
MICROBIOME_SAMPLE_00294	SSA_West	West	true	false	Female	22	High_fiber_plant_rich	Prevotella	4.3	235	0.0663	0.6896	0.1359	0.1082	5	1.837385	3.019023
MICROBIOME_SAMPLE_00295	SSA_West	West	true	false	Female	47	Mixed_transition	Prevotella	4.064	187	0.0742	0.6464	0.1406	0.1387	3.471556	3.205473	3.11428
MICROBIOME_SAMPLE_00296	SSA_West	West	true	false	Female	52	Mixed_transition	Ruminococcus_like	3.699	220	0.1719	0.1996	0.2184	0.4101	3.560551	2.967575	3.58705
MICROBIOME_SAMPLE_00297	SSA_West	West	true	false	Female	53	High_fiber_plant_rich	Prevotella	4.771	207	0.0522	0.6222	0.1741	0.1515	4.19304	2.410666	2.498903
MICROBIOME_SAMPLE_00298	SSA_West	West	true	false	Female	46	Mixed_transition	Bacteroides	4.091	273	0.558	0.0916	0.2064	0.144	2.647883	3.528317	2.418979
MICROBIOME_SAMPLE_00299	SSA_West	West	true	false	Female	31	Mixed_transition	Prevotella	3.593	222	0.0674	0.6212	0.1361	0.1753	4.483777	2.388443	2.540398
MICROBIOME_SAMPLE_00300	SSA_West	West	true	false	Female	54	High_fiber_plant_rich	Prevotella	3.478	207	0.1039	0.6171	0.151	0.128	4.288797	2.838012	2.794854

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